Prostar

Proteomic statistical analysis with R

Prostar is a software tool for the statistical analysis of quantitative data from discovery proteomics experiments. Its user-friendly, Shiny-based interface provides an accessible workflow for exploring, processing, and performing differential analysis of proteomics datasets.

Prostar brings together established and state-of-the-art data analysis methods in a documented and continuously updated and easy to install environment, making advanced proteomics analysis accessible without requiring extensive programming expertise.

Learn more Get Prostar

Citation

Maintaining Prostar as free software is a heavy duty. Please cite the following reference

S. Wieczorek, F. Combes, C. Lazar, Q. Giai-Gianetto, L. Gatto, A. Dorffer, A.-M. Hesse, Y. Couté, M. Ferro, C. Bruley and T. Burger. DAPAR & ProStaR: software to perform statistical analyses in quantitative discovery proteomics. Bioinformatics 33(1), 135-136, 2017.
http://doi.org/10.1093/bioinformatics/btw580.

News

 28/09/2026

Prostar2 is now in internal alpha testing!

  • Prostar2 bulk protein-centric workflow has entered internal alpha testing and is currently being evaluated in-house ahead of its wider release.
  • Bulk-peptide-centric and SC-peptide-centric workflow are to come.
 31/08/2026

MagellanNTK (Prostar2 engine) has been submitted to Bioconductor!

  • The package acceptance process on Bioconductor is currently underway.
 18/05/2026

DaparToolshed is now available through Bioconductor!